University of California


Partial list of installed software applications

  • Tools/utilities: bc, ImageMagick, gnuplot, xmgrace
  • Math and numerical libraries: fftw2, fftw3, GSL, MKL, Scalapack
  • MPI: OpenMPI (we will only support OpenMPI not MPICH and MVAPICH)
  • Compilers: icc/ifort, pgi
  • Debuggers and profilers: Alinea DDT, Intel idb, TAU, Valgrind
  • Applications and Packages: VASP, R, Octave, ABINIT, Matlab, Q-Chem, PAUP, Gaussian, Amber
  • I/O libraries: HDF4, HDF5, NetCDF, NCO